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Jmol JavaScript applet jmolApplet_0__804261206180473__ initializing
Jmol getValue debug null
Jmol getValue logLevel null
Jmol getValue allowjavascript null
AppletRegistry.checkIn(jmolApplet_0__804261206180473__)
vwrOptions:
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setting document base to "https://pdb101.rcsb.org/learn/structural-biology-highlights/designer-proteins"
(C) 2015 Jmol Development
Jmol Version: 14.7.0_2016.06.27 2016-06-27 01:32
java.vendor: Java2Script (HTML5)
java.version: 2016-05-08 13:20:27 (JSmol/j2s)
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Jmol getValue emulate null
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Jmol getValue APPLETREADYCallback Jmol._readyCallback
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callback set for APPLETREADYCallback Jmol._readyCallback APPLETREADY
Jmol getValue ATOMMOVEDCallback null
Jmol getValue CLICKCallback null
Jmol getValue DRAGDROPCallback null
Jmol getValue ECHOCallback null
Jmol getValue ERRORCallback null
Jmol getValue EVALCallback null
Jmol getValue HOVERCallback null
Jmol getValue IMAGECallback null
Jmol getValue LOADSTRUCTCallback null
Jmol getValue MEASURECallback null
Jmol getValue MESSAGECallback null
Jmol getValue MINIMIZATIONCallback null
Jmol getValue SERVICECallback null
Jmol getValue PICKCallback null
Jmol getValue RESIZECallback null
Jmol getValue SCRIPTCallback null
Jmol getValue SYNCCallback null
Jmol getValue STRUCTUREMODIFIEDCallback null
Jmol getValue doTranslate null
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0 FM /pdb/learn/structural-biology-highlights/2kl8_1.pdb
1 FM /pdb/learn/structural-biology-highlights/fr28.overlap.pdb
2 FM /pdb/learn/structural-biology-highlights/2lv8_1.pdb
3 FM /pdb/learn/structural-biology-highlights/r769.overlap.pdb
4 FM /pdb/learn/structural-biology-highlights/2ln3_1.pdb
5 FM /pdb/learn/structural-biology-highlights/if14.overlap.pdb
6 FM /pdb/learn/structural-biology-highlights/2lvb_1.pdb
7 FM /pdb/learn/structural-biology-highlights/p036.overlap.pdb
8 FM /pdb/learn/structural-biology-highlights/2lta_1.pdb
9 FM /pdb/learn/structural-biology-highlights/rn07.overlap.pdb
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loadScript /js/jsmol/j2s/java/util/zip/ZipInputStream.js
loadScript /js/jsmol/j2s/java/util/zip/InflaterInputStream.js
loadScript /js/jsmol/j2s/JU/InflaterInputStream.js
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FileManager opening url https://pdb101.rcsb.org/pdb/learn/structural-biology-highlights/2kl8_1.pdb
The Resolver thinks Pdb
loadScript /js/jsmol/j2s/core/corebio.z.js
DE NOVO PROTEIN 30-JUN-09 2KL8
SOLUTION NMR STRUCTURE OF DE NOVO DESIGNED FERREDOXIN-LIKE FOL
PROTEIN, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET OR15
found biomolecule 1: A
biomolecule 1: number of transforms: 1
Setting space group name to P 1
2KL8
FileManager opening url https://pdb101.rcsb.org/pdb/learn/structural-biology-highlights/fr28.overlap.pdb
The Resolver thinks Pdb
FileManager opening url https://pdb101.rcsb.org/pdb/learn/structural-biology-highlights/2lv8_1.pdb
The Resolver thinks Pdb
DE NOVO PROTEIN 29-JUN-12 2LV8
SOLUTION NMR STRUCTURE DE NOVO DESIGNED ROSSMANN 2X2 FOLD PROT
NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) TARGET OR16
found biomolecule 1: A
biomolecule 1: number of transforms: 1
Setting space group name to P 1
2LV8
FileManager opening url https://pdb101.rcsb.org/pdb/learn/structural-biology-highlights/r769.overlap.pdb
The Resolver thinks Pdb
FileManager opening url https://pdb101.rcsb.org/pdb/learn/structural-biology-highlights/2ln3_1.pdb
The Resolver thinks Pdb
DE NOVO PROTEIN 15-DEC-11 2LN3
SOLUTION NMR STRUCTURE OF DE NOVO DESIGNED PROTEIN, IF3-LIKE F
NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET OR135 (CASD T
found biomolecule 1: A
biomolecule 1: number of transforms: 1
Setting space group name to P 1
2LN3
FileManager opening url https://pdb101.rcsb.org/pdb/learn/structural-biology-highlights/if14.overlap.pdb
The Resolver thinks Pdb
FileManager opening url https://pdb101.rcsb.org/pdb/learn/structural-biology-highlights/2lvb_1.pdb
The Resolver thinks Pdb
DE NOVO PROTEIN 30-JUN-12 2LVB
SOLUTION NMR STRUCTURE DE NOVO DESIGNED PFK FOLD PROTEIN, NORT
STRUCTURAL GENOMICS CONSORTIUM (NESG) TARGET OR250
found biomolecule 1: A
biomolecule 1: number of transforms: 1
Setting space group name to P 1
2LVB
FileManager opening url https://pdb101.rcsb.org/pdb/learn/structural-biology-highlights/p036.overlap.pdb
The Resolver thinks Pdb
FileManager opening url https://pdb101.rcsb.org/pdb/learn/structural-biology-highlights/2lta_1.pdb
The Resolver thinks Pdb
DE NOVO PROTEIN 15-MAY-12 2LTA
SOLUTION NMR STRUCTURE OF DE NOVO DESIGNED PROTEIN, ROSSMANN 3
NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET OR157
found biomolecule 1: A
biomolecule 1: number of transforms: 1
Setting space group name to P 1
2LTA
FileManager opening url https://pdb101.rcsb.org/pdb/learn/structural-biology-highlights/rn07.overlap.pdb
The Resolver thinks Pdb
openFiles(10) 1444 ms
reading 15729 atoms
ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false
10 models in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.
Default Van der Waals type for model set to Babel
15729 atoms created
ModelSet: autobonding; use autobond=false to not generate bonds automatically
Jmol 14.7.0_2016.06.27 2016-06-27 01:32 DSSP analysis for model 2.1 - null
NOTE: Backbone amide hydrogen positions are present and will be ignored. Their positions will be approximated, as in standard DSSP analysis.
Use SET dsspCalculateHydrogenAlways FALSE to not use this approximation.
Jmol 14.7.0_2016.06.27 2016-06-27 01:32 DSSP analysis for model 4.1 - null
NOTE: Backbone amide hydrogen positions are present and will be ignored. Their positions will be approximated, as in standard DSSP analysis.
Use SET dsspCalculateHydrogenAlways FALSE to not use this approximation.
Jmol 14.7.0_2016.06.27 2016-06-27 01:32 DSSP analysis for model 6.1 - null
NOTE: Backbone amide hydrogen positions are present and will be ignored. Their positions will be approximated, as in standard DSSP analysis.
Use SET dsspCalculateHydrogenAlways FALSE to not use this approximation.
Jmol 14.7.0_2016.06.27 2016-06-27 01:32 DSSP analysis for model 8.1 - null
NOTE: Backbone amide hydrogen positions are present and will be ignored. Their positions will be approximated, as in standard DSSP analysis.
Use SET dsspCalculateHydrogenAlways FALSE to not use this approximation.
Jmol 14.7.0_2016.06.27 2016-06-27 01:32 DSSP analysis for model 10.1 - null
NOTE: Backbone amide hydrogen positions are present and will be ignored. Their positions will be approximated, as in standard DSSP analysis.
Use SET dsspCalculateHydrogenAlways FALSE to not use this approximation.
Time for creating model: 332 ms
10 models
15729 atoms selected
15729 atoms selected
8300 atoms selected
162 atoms selected
180 atoms selected
180 atoms selected
180 atoms selected
180 atoms selected
13059 atoms hidden
Script completed
Jmol script terminated
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