Molecule of the Month: Parvoviruses

Viruses that cause distemper are surrounded by an icosahedral capsid

Capsids from feline panleukopenia virus (top) and canine parvovirus (bottom).
Capsids from feline panleukopenia virus (top) and canine parvovirus (bottom).
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Viruses are finely tuned to perform their deadly job. Many viruses are highly specific: they infect only a particular animal or plant, and may even only infect a few types of cells within their preferred hosts. However, viruses occasionally cross the line, and gain the ability to infect other hosts. This is often termed viral emergence, and has been sensationalized as a major threat to global health in books such as The Hot Zone. Fortunately, this type of switching occurs only rarely, but when it does, it can be a disaster. For instance, several of the largest historic pandemics of influenza have been caused by emergence of human viruses from bird viruses. An even more recent viral emergence has occurred in the parvoviruses, where a cat virus suddenly mutated and caused a global pandemic disease in dogs.


Feline panleukopenia virus, shown here at the top from PDB entry 1fpv , is a tiny virus that causes feline distemper. It often attacks kittens, killing all of their white blood cells and also attacking cells in the intestine. If untreated, the disease is often fatal, either due to dehydration or secondary bacterial infection. Fortunately, an effective vaccine is available which largely protects the domestic cat population from this devastating disease.

Cats and Dogs

In the late 1970s, a pandemic swept the entire globe, infecting dogs with a similar disease. When researchers looked closer, they discovered a small virus, shown here at the bottom from PDB entry 2cas . It is nearly identical to feline panleukopenia virus, with only a few changes in amino acids, and was named canine parvovirus. By careful study of dogs that had died in the preceding years, researchers were able to uncover the emergence and rapid evolution of this canine virus from the feline virus. It appears that a few small mutations suddenly allowed the virus to attack dog cells, and then the virus swept around the world, infecting dog populations.

Changing Hosts

Two mutations on the surface of these two viruses, shown on the bottom structure in blue and green, determine their targets for infection. Both viruses attach to the transferrin receptor on cell surfaces. This receptor normally picks up transferrin, a protein involved in iron transport, out of the blood and transports it inside the cell. The virus catches a ride on this receptor, using it to travel into the cell. The receptors in cat cells and dog cells are slightly different, and the two mutations on the viral surfaces match these differences perfectly.

Capsid of the human parvovirus B19.
Capsid of the human parvovirus B19.
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A Human Parvovirus

Many other examples of parvoviruses have been discovered, including several that infect human cells. The first human parvovirus that was discovered is the B19 virus, shown here from PDB entry 1s58 . It causes a childhood disease called "fifth disease," so called because it was the fifth disease that was discovered that causes a similar rash. Infection by B19 is widespread--by age 15 half of the population is typically infected, and most people will be infected sometime in their life. The symptoms are usually mild, often just showing a reddening of the skin, although it occasionally leads to more severe complications such as arthritis, especially for infections later in life.

Exploring the Structure

Canine Parvovirus (PDB entry 4dpv)

Parvovirus capsids are compact, altogether just a bit bigger than a ribosome (the term "parvum" means "small" in Latin). They are composed of 60 copies of a capsid protein, surrounding a single strand of DNA. The canine parvovirus structure shown here, from PDB entry 4dpv , includes the entire structure, including proteins and DNA. The proteins are colored here in groups of five: five proteins that associate around a five-fold axis are colored white, five more are colored red, etc. Notice how the chains interlock, making a very sturdy protein shell. To see the DNA inside, click on the image for an interactive Jmol.

Topics for Further Discussion

  1. Can you find other examples of parvoviruses in the PDB? Are their structures similar to the feline, canine and human viruses shown here?
  2. The chains of parvoviruses capsid interlock with one another. Is this true of the chains of other virus capsids? What are some advantages and disadvantages of interlocking chains?


  1. M. G. Rossman, F. Arisaka, A. J. Battisti, V. D. Bowman, P. R. Chipman, A. Fokine, S. Hafenstein, S. Kanamaru, V. A. Kostyuchenko, V. V. Mesyanzhinov, M. M. Shneider, M. C. Morais, P. G. Leiman, L. M. Palermo, C. R. Parrish and C. Xiao (2007) From structure of the complex to understanding of the biology. Acta Crystallographica D63, 9-16.
  2. C. R. Parrish and Y. Kawaoka (2005) The origins of new pandemic viruses: the acquisition of new host ranges by canine parvovirus and influenza A viruses. Annual Review of Microbiology 59, 553-586.
  3. N. S. Young and K. E. Brown (2004) Parvovirus B19. New England Journal of Medicine 350: 586-597.
  4. K. Hueffer and C. R. Parrish (2003) Parvovirus host range, cell tropisn and evolution. Current Opinion in Microbiology 6, 392-398.

May 2010, David Goodsell
About Molecule of the Month
The RCSB PDB Molecule of the Month by David S. Goodsell (The Scripps Research Institute and the RCSB PDB) presents short accounts on selected molecules from the Protein Data Bank. Each installment includes an introduction to the structure and function of the molecule, a discussion of the relevance of the molecule to human health and welfare, and suggestions for how visitors might view these structures and access further details.More