A Deep Dive into Computed Structure Model Exploration at RCSB.org
Webinar hosted by RCSB PDB/Rutgers Institute for Quantitative Biomedicine | April 30, 2024
Learn how to use RCSB.org features to navigate 3D predicted protein structures in the context of experimentally-determined PDB structures. Two case studies are provided: Low-density Lipoprotein Receptor Adapter Protein 1 (LDLRAP1) and Class II aminoacyl-tRNA synthetases.
After watching the videos featured in this course, you will be able to:
- Browse Annotations to find relevant PDB Structures and related Computed Structure Models
- Group search hits to get non-redundant results
- Explore sequences in 3D context
- Align and analyze multiple related 3D structures
- Search structures by Sequence and 3D Structure similarity
- Use Structure Motif search
Additional materials for this course are available:
Click on the image below to play the video.
Welcome and Introduction to RCSB.org
Stephen K. Burley
Director, RCSB PDB
Case Study: Low-density Lipoprotein Receptor Adapter Protein 1 (LDLRAP1)
Yana Rose
Scientific Software Developer & Data Architect, RCSB PDB/UCSD
Case Study: Class II Aminoacyl-tRNA Synthetases
Sebastian Bittrich
Scientific Software Developer, RCSB PDB/UCSD
