News 2020
New Calendar Celebrates 50 Years of the PDB
12/31
Season's Greetings
12/28
Celebrating 20 Years of Molecule of the Month
12/22
Scientific Software Developers and Postdocs
12/15
SARS-CoV-2 mRNA Vaccine
12/09
Structural Biology and Nobel Prizes
12/07
Molecular Origami: Green and Red Fluorescent Proteins
12/01
Biocurator Explores SARS-CoV-2 Proteins in Virtual Reality
11/24
Video: Neuronal Signaling and Sodium-Potassium Pump
11/17
Molecular Landscapes: Coronavirus
11/05
American Public Health Association Film Festival
10/25
PDB Turns 49
10/20
Happy Birthday, Irving Geis
10/18
Join Us at the STEMteachersEXPO
10/16
Fall Newsletter Published
10/13
Dexamethasone and Cytokine Storms
10/12
2020 Nobel Prize in Chemistry
10/07
Award-Winning Image
10/06
Structural Biology and Nobel Prizes
09/29
Poster Prize Awarded at ACA
09/24
Poster Prize Awarded at ISMB
09/20
Respiratory Droplet
09/15
Virtual Boot Camp
09/08
Congratulations, Sophia!
09/01
Download Molecular Landscapes
08/24
Resources to Fight the COVID-19 Pandemic
08/18
Integrative Illustration for Coronavirus Outreach
08/11
Insights from 20 Years of the Molecule of the Month
08/04
Summer Newsletter Published
07/28
Resources to Fight the COVID-19 Pandemic
07/21
Impact of the Protein Data Bank Across Scientific Disciplines
06/30
PDB-101 Coronavirus Resources
06/23
RCSB PDB in the Time of COVID-19
06/16
Coronavirus CellPAINT Contest Winners
06/08
Education Corner: Biomolecular Modeling in Elementary and Middle School
06/02
Award-Winning Videos on Molecular Mechanisms of Opioid Action
05/19
Happy 70th Anniversary, National Science Foundation
05/10
Vote Now for the Viewer's Choice Award
05/05
Coronavirus Background For Virtual Meetings
05/03
June 1: Retirement of Protein Workshop and Ligand Explorer
05/01
Enter the Coronavirus CellPAINT Contest by May 31
04/28
Celebrate DNA Day on April 25
04/24
Annual Report Published
04/20
Molecular Backgrounds For Virtual Meetings
04/07
Spring Newsletter Published
04/06
High School Students: Submit Opioid Action Videos Before April 28
03/31
Beta Test the Next Generation RCSB.org
03/25
Video: Fighting Coronavirus with Soap
03/23
Coloring Coronavirus
03/17
Brain Awareness Week
03/16
Curated Files for 3D Printing
03/06
Education Corner: Using PDB in the College Classroom
02/19
Molecular Landscapes: Coronavirus
02/15
Molecular Valentines
02/13
COVID-19 Coronavirus Resources
02/06
New Coronavirus Protease Structure Available
02/04
2019 FASEB BioArt Winner
01/21
Winter Newsletter Published
01/14
Molecule of the Month Newsletter
01/06
Celebrating 20 Years of Molecule of the Month
01/02

Coronavirus CellPAINT Contest Winners

06/08 

CellPAINT can be used to create drawing pictures of cellular and viral systems. The Scripps Research Center for Computational Structural Biology (CCSB) in association with RCSB PDB hosted an coronavirus image contest created using CellPAINT in the categories of Science and Art. Dozens of entries were submitted from around the world from middle school students to professionals.

Best in Science

How SARS-CoV-2 interacts with the surface proteins of the target cell by Marta Palma Rodríguez (Graduate Student, Hospital General Universitario de Valencia).  <P>
<I>I started using CellPAINT (web-based) to design the illustration. When I finished with the diagram, I used Adobe Photoshop CC 2019 to create the labels and correct the colors. As the receptor TMPRSS2, present in the target cell and very important in the viral priming, is not present in CellPAINT, I decided to look for a serin protease like protein in the PDB and to add it with this program. 	</I>How SARS-CoV-2 interacts with the surface proteins of the target cell by Marta Palma Rodríguez (Graduate Student, Hospital General Universitario de Valencia).

I started using CellPAINT (web-based) to design the illustration. When I finished with the diagram, I used Adobe Photoshop CC 2019 to create the labels and correct the colors. As the receptor TMPRSS2, present in the target cell and very important in the viral priming, is not present in CellPAINT, I decided to look for a serin protease like protein in the PDB and to add it with this program.

Best in Art

Heroes of hope (Kanika Khanna, Stanford University)<P>
<I>The contest came forth at a time when almost everyone is struggling with the changes accompanying the pandemic. Each of us are grappling with one or another grief and ‘hoping’ for something good to happen. This contest was a way for me to get out of my own grief and create something that would be a source of joy not only for me but may be someone else out there as well. And who better to dedicate this creation to other than our ‘Heroes of hope’, the health care workers at the frontline who are fighting the pandemic day in and day out, without any selfish motives. Putting their lives at risk, away from their families, I can’t even begin to imagine the agony they must be going through. 
<OL>
<LI>The central figure of the creation is a masked healthcare worker and all the components that make up the worker are molecules in our body that fight viral and bacterial infections, antibodies and components of complement system, namely IgA, IgG, IgM and Complement factors C3, H, C4A and B represented in the face, mask, neck and body of the worker. This is to represent that just as our body uses these molecules to fight an infection, the health care worker is fighting the deadly pandemic for the entire world and he/she may be our ‘antibody’ against the virus, so to say. </LI>
<LI>The mask also has actin which is known to have a rare combination of strength and sensitivity, being used in some of the most demanding structural activities in the body. This also represents the importance of wearing masks in these times not only to protect ourselves from the virus but others around us. I have also put a few ACE2 receptors embedded in the mask to show that these can be ‘buried’ or protected from viral infection with the proper use of face masks. </LI>
<LI>The virus particles shown on the outside have their nucleocapsid proteins arranged in symbol of ‘theta’, which is the Greek symbol of death representing the fatal powers of the virus. 
I am hoping with this creation, I am able to reach out to a broader audience with two messages. As the title of the creation ‘Heroes of hope’ suggests, we need to thank our healthcare workers big time for the contributions they are making to fight the deadly pandemic. Second, we need to be more vigilant about how we conduct ourselves so that we can keep each other safe during these tough times. Only then can we hope for a better future for the world today!</LI>
</OL></I>Heroes of hope (Kanika Khanna, Stanford University)

The contest came forth at a time when almost everyone is struggling with the changes accompanying the pandemic. Each of us are grappling with one or another grief and ‘hoping’ for something good to happen. This contest was a way for me to get out of my own grief and create something that would be a source of joy not only for me but may be someone else out there as well. And who better to dedicate this creation to other than our ‘Heroes of hope’, the health care workers at the frontline who are fighting the pandemic day in and day out, without any selfish motives. Putting their lives at risk, away from their families, I can’t even begin to imagine the agony they must be going through.

  1. The central figure of the creation is a masked healthcare worker and all the components that make up the worker are molecules in our body that fight viral and bacterial infections, antibodies and components of complement system, namely IgA, IgG, IgM and Complement factors C3, H, C4A and B represented in the face, mask, neck and body of the worker. This is to represent that just as our body uses these molecules to fight an infection, the health care worker is fighting the deadly pandemic for the entire world and he/she may be our ‘antibody’ against the virus, so to say.
  2. The mask also has actin which is known to have a rare combination of strength and sensitivity, being used in some of the most demanding structural activities in the body. This also represents the importance of wearing masks in these times not only to protect ourselves from the virus but others around us. I have also put a few ACE2 receptors embedded in the mask to show that these can be ‘buried’ or protected from viral infection with the proper use of face masks.
  3. The virus particles shown on the outside have their nucleocapsid proteins arranged in symbol of ‘theta’, which is the Greek symbol of death representing the fatal powers of the virus. I am hoping with this creation, I am able to reach out to a broader audience with two messages. As the title of the creation ‘Heroes of hope’ suggests, we need to thank our healthcare workers big time for the contributions they are making to fight the deadly pandemic. Second, we need to be more vigilant about how we conduct ourselves so that we can keep each other safe during these tough times. Only then can we hope for a better future for the world today!

Selected Entries in Science

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Selected Entries in Art

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Many thanks to everyone who participated.


Past news and events have been reported at the RCSB PDB website and past Newsletters.