Register Now for Virtual Crash Course: Using KBase to access PDB Structures and CSMs
10/21
Register for Virtual Crash Course: Using K-Base to access PDB Structures and CSMsLearn about the protein structure-related tools, visualizations, and workflows that have been integrated into KBase on Thursday November 10, 2022 (1:00 - 5:00 pm EDT).
Registration is required for the Zoom meeting information, but attendance is at no charge.
Please sign up at https://go.rutgers.edu/xfudv6m4.
1:00–1:05 PM
Welcome and Introduction
Stephen K. Burley, M.D., D.Phil., Director, RCSB PDB
1:05–1:20 PM
Review of Joint DOE KBase/RCSB PDB Crash Course Objectives
Christopher Henry, Ph.D., KBase, Argonne National Laboratory
1:20–2:00 PM
Protein Candidates from Function Queries in KBase
Janaka N. Edirisinghe, Ph.D. - KBase, Argonne National Laboratory
2:00–2:30 PM
Accessing Experimental Structures from the PDB
Dennis Piehl, Ph.D., RCSB PDB
2:30-3:00 PM
Accessing Computed Structure Models generated using AlphaFold2 or RoseTTAFold(2)
Brinda Vallat, Ph.D., RCSB PDB
3:00-3:15 PM
Break
3:15–3:45 PM
Introduction to Mol* Molecular Graphics System
Shuchismita Dutta, Ph.D., RCSB PDB
3:45-4:15 PM
Viewing Protein Structures in KBase with Mol*
Qizhi Zhang, Ph.D. - KBase, Argonne National Laboratory
4:15-4:45 PM
Making the Best use of Protein Structure Data in KBase and PDB
Christopher Henry, Ph.D,, KBase
Co-organizers
Stephen K. Burley (RCSB PDB Protein Data Bank, Rutgers University) and Christopher Henry (Systems Biology Knowledgebase, Argonne National Laboratory).
Past news and events have been reported at the RCSB PDB website and past Newsletters.
