News 2023
Peak Performance for 2024
12/26
Season's Greetings
12/21
Celebrate #NationalCrosswordDay with Sequence Events
12/19
Molecular Origami: Green and Red Fluorescent Proteins
12/18
PDB Entries with Novel Ligands Now Distributed Only in PDBx/mmCIF and PDBML File Formats
12/12
Education Corner: MedChemBlog
12/08
Explore the Structural Biology of Health and Nutrition
12/04
December 1: World AIDS Day
11/30
Watch the Crash Course: RCSB PDB APIs
11/28
Papers Published in Special Issue of Journal of Molecular Biology
11/24
Nov 18-24: World Antimicrobial Awareness Week
11/18
Nov 17: WHO's Cervical Cancer Elimination Day of Action
11/16
Meet RCSB PDB at ABRCMS
11/15
November 14 is World Diabetes Day
11/13
Molecular Landscapes
11/07
Explore Antibiotic Resistance in 3D
11/02
Explore the Structural Biology of Viruses
10/31
Access Computed Structure Model Annotations
10/24
Meet RCSB PDB at SACNAS
10/23
Happy Birthday, PDB!
10/20
Poster Prize Awarded at The Protein Society
10/18
Happy Birthday, Irving Geis
10/15
Poster Prize Awarded at IUCr
10/11
Download PAE JSON Files for AlphaFold Models
10/10
Fall Newsletter Published
10/08
The Nobel Prize in Physiology or Medicine 2023
10/05
Structural Biology and Nobel Prizes
10/01
ASBMB Members: Register Now for Virtual Event
09/26
Undergrads/Grads: January 2024 Science Communication Boot Camp (Cancelled)
09/25
Poster Prize Awarded at ACA 2023
09/19
Register Now for October Virtual Crash Courses on RCSB PDB APIs
09/14
Poster Prize Awarded at ISMB 2023
09/12
Take the Tabular Reports Survey and Win
09/11
Head Back to School with PDB-101
09/05
Turning Global Data into Global Knowledge
08/29
Education Corner: Empowering Educators
08/29
Create Videos About Structural Science
08/23
Meet the RCSB PDB and wwPDB at IUCr
08/16
Bragg Your Pattern at IUCr
08/08
New Poster Available for Download
08/01
Summer Newsletter Published
07/18
Meet the RCSB PDB at ACA
07/04
Introducing the Nucleic Acid Knowledgebase
06/27
Explore the Structural Biology of Bioenergy
06/19
Toggle to "Opt-in" to Access Computed Structure Models Alongside PDB Data
06/19
Guide to Understanding PDB Data: Intro to APIs
06/13
Watch the Crash Course: Understanding PDBx/mmCIF
06/13
Education Corner: Bragg Your Pattern at IUCr
06/06
Easily Build Advanced Searches
05/30
Molecular Landscapes
05/29
Award-Winning Videos on Molecular Mechanisms of Targeted Cancer Therapies
05/16
Perform Improved Pairwise Structure Alignments
05/09
Education Corner: ACA Literacy Portal
05/09
Beginner's Guide to PDB Structures and PDBx/mmCIF
05/03
Helen Berman Elected to National Academy of Sciences
05/02
Vote Now for the Viewer's Choice Award
05/01
Register Now for May 3 Virtual Crash Course: Understanding PDBx/mmCIF
04/30
Annual Report Published
04/26
Search for Structures By Date
04/25
Poster Prize Awarded at #DiscoverBMB
04/24
Celebrate DNA Day on April 25
04/21
Spring Newsletter Published
04/18
Upload Structure Files to Search the PDB
04/11
Using KBase to access PDB Structures and CSMs
04/03
Register Now for Virtual Crash Course: Understanding PDBx/mmCIF
04/02
High School Students: Submit Videos By April 24
03/28
Meet RCSB PDB at the #DiscoverBMB Meeting
03/23
Search for Structural Motifs
03/20
Register Now for Crash Course: Python Scripting for Biochemistry & Molecular Biology (Part 2)
03/20
Keeping Up with RCSB PDB News
03/18
Brain Awareness Week
03/12
Tribute to Dr. Olga Kennard
03/09
New Coloring Page: Myoglobin in a muscle cell
03/07
Paper Published: EM Holdings of the PDB
02/28
Molecular Landscapes
02/20
Meet RCSB PDB at The Biophysical Society Meeting
02/16
Congratulations to Shuchismita Dutta
02/14
Molecular Valentines
02/09
Education Corner: Fundamentals of Biochemistry
02/07
February 4 is World Cancer Day
02/02
Explore Even More Computed Structure Models Alongside PDB Data
02/01
Winter Newsletter Published
01/19
Undergrads: Spend your summer with RCSB PDB
01/12
PDB Reaches a New Milestone: 200,000+ Entries
01/10

Tribute to Dr. Olga Kennard

03/09 

The wwPDB consortium would like to pay tribute to Dr. Olga Kennard OBE FRS upon the sad news of her passing. Her pioneering work on the development of crystallographic databases laid the groundwork for modern molecular structure data archiving and the subsequent scientific breakthroughs that have made use of these data.

Olga was renowned for establishing the CCDC (Cambridge Crystallographic Data Centre) to maintain the Cambridge Structural Database (CSD) for small molecules. The CSD was first established by Olga in 1965, based on activities in her research group and has become the world’s repository for small-molecule organic and metal-organic crystal structures. Olga collected these data so that she could study how crystals form and her surveys were fundamental in the development of “crystal engineering”. Now containing over one million structures from X-ray and neutron diffraction analyses, this database of accurate 3D structures has become an essential resource to scientists around the world.

The increased interest and breakthroughs in solving biological molecular structures lead to the founding of the PDB (Protein Data Bank) by Walter Hamilton at BNL (Brookhaven National Laboratory). Olga worked with Walter to support the foundation of the PDB archive, with the archive initially operated jointly between BNL and CCDC (see the 1971 PDB announcement in Nature New Biology). While data processing was carried out at BNL, CCDC was responsible for organization of the data archive, with Olga and CCDC’s experience in data archiving hugely beneficial. Nowadays, the small molecules contained in biological structures archived in the PDB are validated using CCDC software which incorporates the knowledge embedded in the CSD.

<I>Left to right: Helen M. Berman, Janet Thornton, Shoshana Wodak, and Olga Kennard at the PDB-SwissProt Symposium in Jerusalem in 1996.</I>Left to right: Helen M. Berman, Janet Thornton, Shoshana Wodak, and Olga Kennard at the PDB-SwissProt Symposium in Jerusalem in 1996.

Olga was a person of great integrity and drive and, in an age before computers had really developed, she saw the value of cross-data analysis to derive principles governing how small molecules interact. Very few scientists can claim that their work has enabled thousands of papers and investigations. Olga’s foresight and determination to establish and maintain the CSD means she is among those giants on whose shoulders many other scientists stand.

See also Celebrating Dr Olga Kennard OBE FRS, Founder of the Cambridge Structural Database, 1924 – 2023 at CCDC


Past news and events have been reported at the RCSB PDB website and past Newsletters.