News 2025
PDB-101 Focus: Peak Performance
07/22
Meet the RCSB PDB at ACA 75
07/18
Color the Diverse 3D Shapes Studied by Crystallographers
07/15
Summer Newsletter Published
07/08
Register for the Aug 11 Virtual Office Hour on Pairwise Alignment
07/03
Download New Poster: CSMs and PDB Structures
07/01
Watch the Webinar: Python For Cheminformatics-Driven Molecular Docking
07/01
Python Toolkit for Accessing RCSB.org Search and Data APIs
06/24
Watch: Deep Dive into Computed Structure Model Exploration at RCSB.org
06/19
Register for the ACA Workshop on PDB Deposition
06/16
Download an image of H5N1
06/13
PDB-101 Focus: Peak Performance
06/10
Watch the Sequence Annotations Viewer Office Hour
06/09
Explore Integrative Structures at RCSB.org
05/28
Annual Report Published
05/26
Register Now for Tutorial: Introduction to Molecular Animation
05/22
Video: Immunology and Cancer
05/20
Access Computed Structure Model Annotations
05/19
PDB-101 Focus: Peak Performance
05/16
Paper Published: A new chapter for Molecule of the Month
05/13
Education Corner: BASIL, RCSB Protein Data Bank, and the NSF
05/12
Watch the Webinar: Seeing Bird Flu in 3D
05/06
Poster Prize Awarded at ASBMB
05/06
Commemorating 75 Years of Discovery and Innovation at the NSF
05/04
Toggle to "Opt-in" to Access Computed Structure Models Alongside PDB Data
05/01
Watch the Webinar: Streamlining Access to RCSB PDB APIs with Python
04/28
Education Corner: Paper Nucleic Acid Models for Hands-on Education
04/25
Celebrate DNA Day on April 25
04/22
April 22 is Earth Day
04/18
Introducing Extended PDB IDs at RCSB.org
04/15
Paper Published: Visualizing and analyzing 3D biomolecular structures using Mol*
04/15
Meet RCSB PDB at ASBMB
04/11
Sequence Annotations Viewer: Geometry Validation
04/08
Spring Newsletter Published
04/07
PDB-101 Focus: Peak Performance
04/03
Paper Published: PDB and a transformative impact on science and society
04/01
Register Now for Crash Course: Python For Cheminformatics-Driven Molecular Docking
03/27
Guide to Understanding PDB Data: Computed Structure Models
03/27
Developers: Switch to Sequence Coordinates Service by May 31, 2025
03/24
Meet RCSB PDB at the American Chemical Society Meeting
03/20
March 24 is World TB Day
03/19
PDB-101 Focus: Peak Performance
03/15
Poster Prize Awarded at The Biophysical Society Meeting
03/11
March 10-16: Brain Awareness Week
03/09
Register for the April 10 Virtual Office Hour on Sequence Annotations Viewer
03/06
IUCr2026 Awaits
03/05
Take the User Survey on Statistics and Win
03/04
Molecular Landscapes
03/04
Register for March Training Events
03/03
Register for the May 8 Workshop on PDB Deposition
03/03
March 4 is International HPV Awareness Day
03/02
Register for the April 7 Virtual Office Hour on Depositing IHM Data
02/25
Paper Published: From two epidemics to the global pandemic to mRNA vaccines and Paxlovid
02/25
Paper Published: Impact of the PDB on drug approvals
02/21
Register Now for Webinar on API Access with Python
02/17
PDB-101 Focus: Peak Performance
02/17
Meet RCSB PDB at The Biophysical Society Meeting
02/13
Register for the March 13 Virtual Office Hour on Supporting Extended PDB IDs
02/10
Molecular Valentines
02/09
Behind Molecule of the Month
02/05
Register Now for Webinar on Seeing Bird Flu in 3D
02/02
February 4 is World Cancer Day
02/01
Frontiers in Data Panel Webinar: Preparing Structural Science Data for 2085
01/28
Award-Winning Image
01/23
Developers: Collaborate with RCSB PDB at Rutgers
01/23
Watch the Webinar: Unlock Rapid Analyses Across the Whole PDB Using BinaryCIF
01/21
January is Cervical Cancer Awareness Month
01/19
Undergrads: Spend your summer with RCSB PDB
01/17
Top Molecules of the Month in 2024
01/16
Winter Newsletter Published
01/14
Paper Published: Updated resources for exploring PDB structures and Computed Structure Models
01/12
Celebrate #NationalMilkDay
01/09
Molecule of the Month: Celebrating 25 Years of Storytelling and Announcing New Beginnings
01/05
20252024202320222021202020192018201720162015

Watch the Webinar: Python For Cheminformatics-Driven Molecular Docking

07/01 

<I>Watch: Python For Cheminformatics-Driven Molecular Docking</I>Watch: Python For Cheminformatics-Driven Molecular Docking

In this workshop, Python scripting is used to explore and compare small molecules that bind to the SARS-CoV2 main protease. A Google CoLab environment is used along with a number of libraries that are heavily accessed for cheminformatics.

At the completion of this workshop, users will be able to:

  • Search BindingDB and create molecular datasets.
  • Use RDKit to manipulate and process molecules.
  • Compare features of families of small molecules using plots and fingerprint analysis
  • Create a workflow for docking multiple ligands to the main protease

The workshop is intended for:

  • Undergraduate students in any STEM discipline
  • Graduate students and postdoctoral researchers in life sciences and data collection
  • Faculty members who want to incorporate Python scripting into their teaching or research
  • Professionals involved in collecting and analyzing data, particularly big data

Questions? Please contact info@rcsb.org.

Participants may also be interested in recordings of past training events, including Python Scripting for Biochemistry & Molecular Biology Part 1 and Part 2, and the 2024 course, Python Scripting for Molecular Docking.

Sign up to receive email notifications about upcoming training courses and events.

Past news and events have been reported at the RCSB PDB website and past Newsletters.